CDS

Accession Number TCMCG051C40086
gbkey CDS
Protein Id XP_024440456.1
Location join(10319020..10319219,10320882..10320990,10321170..10321388,10321524..10321864,10321997..10322060,10322314..10322422,10322513..10322662,10322745..10322893,10322988..10323150,10323269..10323312)
Gene LOC112323234
GeneID 112323234
Organism Populus trichocarpa

Protein

Length 515aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024584688.1
Definition bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category E
Description shikimate dehydrogenase
KEGG_TC -
KEGG_Module M00022        [VIEW IN KEGG]
KEGG_Reaction R02413        [VIEW IN KEGG]
R03084        [VIEW IN KEGG]
KEGG_rclass RC00206        [VIEW IN KEGG]
RC00848        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K13832        [VIEW IN KEGG]
EC 1.1.1.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00400        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004764        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009423        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016614        [VIEW IN EMBL-EBI]
GO:0016616        [VIEW IN EMBL-EBI]
GO:0019632        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043648        [VIEW IN EMBL-EBI]
GO:0043650        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046417        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCATTCAAGAACAACCTCTTAGTGTGCACACCATTAGAATGTGAGACAGCAGGAGAAATGCTGTCTTCCATGAAGAGAGCAGAGACTGAAGGTGCAGACCTTACTGAGCTCCGCCTTGACTCCTTGTCATTCTCTCACAATTCCGAGGTCGAGAAGCTCATTAAACAGAGAACTTTGCCTTCTATAGTTTCTTTCAGGCTCGAGCCATCAAGGATCTCAAGCAACAAAGACAGGAAGAATACATGTTTACAAGTACTGAGACTGGCTTTCGACTTGAACGTCGAGTTCGTTGAAATGGACTACGAGGTGGCTTCTGAAGATGTCATGGCTGAATACGTGTACAATCGTTCCAATACCAAATTAATTGTATCCAGCTACGTTAATGGGAGGAAACCTTCAGCTGAGGAACTTGGTTATTTAATCGCTTGTATGCAGTCTACTGGAGCTGATGTTCTTAAACTAGTACTCGACGTTGAAAAAATCACAGATTTGGCACCTGTTTTCACGATGCTTACACATTGCCAGATCCCCTTAATTGCTCTCGCGGTTGGCAGTAGAGGCCTTATAAGCCAGCTGCTGGGGCCGAAATTTGGTGGGTTTTTGGTCTATGGATCTCTGAGTGACAAAGCAGTACCAGGCATGCCAACTCTGTTAAGTCTTAGACAAATTTATAAGCTTGAATATATAAATGCAGACACAAAAGTTTTTGGTCTCATTTCAAATCCAGTTGGCCATAGTAAAGGTCCTGTTCTGCACAACCCTGCATTTAGACATACTGGATATAATGGAATTTACGTTCCAATGCAAGTGGATGATGTGAAAGAATTCTTTAGGACCTATACGAGCAGTGACTTCGCGGGTTTCAGTGTTGGAATCCCACATAAGGAAGCAGCAGTGGGGTGCTGCGATGAAGTCCATCCACTTGCTAAGTCCATAGGAGCTGTAAATACTATTGTAAGGAGGCCTACTGATGGGAAGCTGGTTGGTTATAATACAGATTGCGATGCTTCTATCTCTGCGATAGAGGATGCTCTCACAGAAAGACGGATTACCCAGAAGGGAGTATTGGAAGCTTCACCTCTATCTGGGAAAACTTTTGTGTTGATTGGAGCAGGAGGAGCAGGAAGAGCGCTTGCTTTTGGGGCCAAAAGCAGAGGGGCTCGGGTGATTATTTTCAATCGCAATTATGAGAGAGCAAGGGCTCTTGCAAAAGCAGTTTCAGGGGAAGCTCTACCATATGAAAGTCTAGACAGATTTCGTCCAGTTAATGGGATGATCCTTGCAAATGCTTCTGCCATTGGAATGGAACCAAATTCAGATCAAAGTCCTGTCTCGAAGGAGATCTTAAAGGCGTGTGAATTGGTATTTGATGCTGTTTACACGCCCCGGAATACAAGGCTCTTGCGGGAGGCTAAAGAGGTTGGGGCTGTCGTGGTGAGCGGGGTGGAAATGTTTATTAGACAGGCTCTTGGGCAGTTCAGACTGTTCACCGGCGGCTTAGCTCCGGAGGCATTCATGCGCAAGCTTGTCTTGGAGCAATTTTGA
Protein:  
MAFKNNLLVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLSFSHNSEVEKLIKQRTLPSIVSFRLEPSRISSNKDRKNTCLQVLRLAFDLNVEFVEMDYEVASEDVMAEYVYNRSNTKLIVSSYVNGRKPSAEELGYLIACMQSTGADVLKLVLDVEKITDLAPVFTMLTHCQIPLIALAVGSRGLISQLLGPKFGGFLVYGSLSDKAVPGMPTLLSLRQIYKLEYINADTKVFGLISNPVGHSKGPVLHNPAFRHTGYNGIYVPMQVDDVKEFFRTYTSSDFAGFSVGIPHKEAAVGCCDEVHPLAKSIGAVNTIVRRPTDGKLVGYNTDCDASISAIEDALTERRITQKGVLEASPLSGKTFVLIGAGGAGRALAFGAKSRGARVIIFNRNYERARALAKAVSGEALPYESLDRFRPVNGMILANASAIGMEPNSDQSPVSKEILKACELVFDAVYTPRNTRLLREAKEVGAVVVSGVEMFIRQALGQFRLFTGGLAPEAFMRKLVLEQF